PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19697
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 83aa    MW: 8473.3 Da    PI: 8.7946
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19697genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000152646323
              ETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
              C +C++ F++   L  H+++H
  EMT19697 26 CRICKRGFTTAQALGGHMNVH 46
              *******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.85E-62250No hitNo description
PfamPF139128.8E-72348IPR007087Zinc finger, C2H2
PROSITE profilePS501579.5152451IPR007087Zinc finger, C2H2
PROSITE patternPS0002802646IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MEGGGLSKAG SPEDSAARRA REAHLCRICK RGFTTAQALG GHMNVHRRRE AEEPPAAGAQ  60
VDSGRAGGGG SQKAGGVEYG NPD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160069.12e-31transcriptional regulator TAC1-like
TrEMBLN1R2I28e-52N1R2I2_AEGTA; Uncharacterized protein
STRINGEMT196971e-52(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63633244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-08C2H2 family protein