PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT20851

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

NAC

Protein Properties

Length: 240aa MW: 27613.1 Da PI: 8.8524

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT20851	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	33.2	1.5e-10	7	170	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeek.ew.yfFskrdkkyatgk.rknra.................... 77 +G+ F+Pt +elv +yL +++ + l vi+e d++++ P+ L +++k + + w +fF+ + ++ + + r EMT20851 7 AGYVFEPTGHELVGHYLMPRAGLGGFFLPGVIEEGvDVLSLRPRALSfpENHKRDYSeVWgFFFTAKLAGETCPTpGAGRCwvqygqekayyggeggreev 107 799********************98888988755******6323444433336777777766555432212233234555445555666666565 PP NAM 78 ......tksgyWk..atgkdkevlsk..kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + + +W+ + g++k+ + ++e+v ++ +++ + + ++t+W m+eyrl EMT20851 108 afrhrfAYRYTWRdgEYGQEKAYYGGegGREEVAFRHRFAYRytWRDGEVMSQTRWRMKEYRL 170 55555444455664445556655554555566999999999633234455679******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	13.493	5	199	IPR003441	NAC domain
Pfam	PF02365	3.7E-9	7	170	IPR003441	NAC domain
SuperFamily	SSF101941	2.09E-9	7	124	IPR003441	NAC domain
SuperFamily	SSF101941	2.09E-9	160	198	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
MANLAEAGYV FEPTGHELVG HYLMPRAGLG GFFLPGVIEE GVDVLSLRPR ALSFPENHKR 60 DYSEVWGFFF TAKLAGETCP TPGAGRCWVQ YGQEKAYYGG EGGREEVAFR HRFAYRYTWR 120 DGEYGQEKAY YGGEGGREEV AFRHRFAYRY TWRDGEVMSQ TRWRMKEYRL NRNAAAFRRA 180 HPSAVPADVV FVVHKVYRKP LIPRSPPPPV DSSSSKDEGF ESYILYPRLD ELMRRLTEGN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020158484.1	1e-126	uncharacterized protein LOC109743803
TrEMBL	M8CCK6	1e-175	M8CCK6_AEGTA; Uncharacterized protein
STRING	EMT20851	1e-176	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12891	22	31