PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20899
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 251aa    MW: 26962.1 Da    PI: 6.7996
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20899genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.2e-09112159455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h+  Er RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  EMT20899 112 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 159
               799***********************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.89E-12106163No hitNo description
SuperFamilySSF474591.14E-17106175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.65108158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-17108173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.6E-7112159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-10114164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MAGFSHLPQQ MEYGLANAGS FLLCHGNPED AAASLEGSSG VLDTPLVATA SVEKKRKPKE  60
DTASLNSAHS KETKESTRKR GGKKQGKEMD EEEEEPKGYI HVRARRGQAT DSHSLSERVR  120
RERISERMRM LQSLVPGCDK VTGKALILDE IINYVQSLQN QVEFLSMRIA SLSPVVYGFG  180
MESGAAFSDQ SQKIEGMFHD AAALPTGPPM NRSSSPAPSQ AMMDTGTSSS SPPYSLQGTQ  240
GRGNNAGQGG D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3654680.0AK365468.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2034G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166246.11e-173transcription factor bHLH137-like
TrEMBLM8BG130.0M8BG13_AEGTA; Transcription factor bHLH137
STRINGEMT208990.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-34bHLH family protein