PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22224
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 313aa    MW: 34026.4 Da    PI: 8.6585
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22224genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57355.91.2e-17111199397
    DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               +q+lw++ Dei+lL G i+f+a++g  p   d++++ye +++s+s+++++  +  K++rLK Kf +             s++h++ +  ls  +Wg
  EMT22224 111 AQKLWTDADEIALLNGAISFRARHGIAPRLpDVEGLYESLRDSLSSHINQAKVYYKLKRLKSKFCNTALP-------PTSTPHERRVRALSADLWG 199
               79************************98877*********************************988766.......7788999999999999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.2E-17112199IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MDTAFKATSG THPSSRPAPV FVDLVFMAVR IGMCGVISER MHTVRGGSVP FVHRQTRPRA  60
DYYGSAPSRK SERKRKPRSF PDSALLSQAI APASSSGGGG GGLGLGGHGA AQKLWTDADE  120
IALLNGAISF RARHGIAPRL PDVEGLYESL RDSLSSHINQ AKVYYKLKRL KSKFCNTALP  180
PTSTPHERRV RALSADLWGT EVAPSAEDLP EAEEPEEEDA DDEYTGADVP LAVSVRLPLV  240
SELLGEYWRR NGRAMSGVSL EKGLGLLGAE EGNVAETRWR RQLDAEMRTQ LRRHDLAKEV  300
FSLLSDTIKG LGP
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3741420.0AK374142.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3055K08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020180064.10.0probable transcription factor At1g66420
TrEMBLM8BJS80.0M8BJS8_AEGTA; Uncharacterized protein
STRINGEMT222240.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.18e-11DNA-binding storekeeper protein-related transcriptional regulator