PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22421
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 234aa    MW: 25197.5 Da    PI: 8.0225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22421genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.92.4e-24139198258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               +Dg+ WrKYGqKe++ s++pr Y+rC+++   gCp++++v++s++d ++ +itY g+H++
  EMT22421 139 EDGFIWRKYGQKEITHSKHPRLYFRCSYKhdiGCPATRQVQQSDDDLSLYVITYFGDHTC 198
               8***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.8E-24133198IPR003657WRKY domain
SuperFamilySSF1182908.63E-23134199IPR003657WRKY domain
SMARTSM007741.1E-35138200IPR003657WRKY domain
PfamPF031063.8E-24139198IPR003657WRKY domain
PROSITE profilePS5081118.567139196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MAALVTPAAS VVSGLVVRGR ESAALLEALL QGGSPQEHGG IRELAAEILL CCDRALAALH  60
GRGREHGGIR ELAAEILLCC DRALAALHGR DGVHAVALAS RKRKSSEPDG AAAQTRPKRR  120
MRANSGSTAT RVEKRWTAED GFIWRKYGQK EITHSKHPRL YFRCSYKHDI GCPATRQVQQ  180
SDDDLSLYVI TYFGDHTCCQ GDGAVAAEEE EDVKMQPFVI NFGSATASST SGAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-21139198968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199104SRKRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177391.11e-135probable WRKY transcription factor 70
TrEMBLM8CGU51e-171M8CGU5_AEGTA; Putative WRKY transcription factor 70
STRINGEMT224211e-172(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-23WRKY DNA-binding protein 70