PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT24561
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 316aa    MW: 35140.2 Da    PI: 6.4451
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT24561genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.23.1e-15132220397
    DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               f+r+ws +De+ +L +l   ++++g+      +a++e + ++++ + +s+++l  K+++LK+++    kk     +   +kehd+  f+lsk++W 
  EMT24561 132 FHRVWSTNDEVRILEALAAHQKEHGVL--PQPNALVEALAGKLDNRaYSSKELQGKVKSLKHRYVSAAKK-----HELPTKEHDRRLFDLSKILWS 220
               89******************9999965..56799*********87626899****************999.....446689**************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-20132220IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAKKRGEKRS APPPPPPPAA SSEETHSGAD ESEDEETIAV SRTPAPKNPP PQPQKGEESE  60
TSDEEEEEEP SPAAPNTAPK KQPPPARQSE DSDSSDDEED GGSESDKDAP PPKPSPKQEA  120
KAPDAKKPRL AFHRVWSTND EVRILEALAA HQKEHGVLPQ PNALVEALAG KLDNRAYSSK  180
ELQGKVKSLK HRYVSAAKKH ELPTKEHDRR LFDLSKILWS GHKYRARAAT ASTAAATAKA  240
NNHEPKGFEE MCELYPYLAE EVKKSMFKRE FGKMDDDKAR LLDEKIKKQR VQQMKVELRR  300
SDLAREVTKA IMDLID
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2492760.0AK249276.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf33f24, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020179917.10.0STOREKEEPER protein-like
TrEMBLA0A453R8X40.0A0A453R8X4_AEGTS; Uncharacterized protein
TrEMBLM8CM640.0M8CM64_AEGTA; Uncharacterized protein
STRINGEMT245610.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.14e-09DNA-binding storekeeper protein-related transcriptional regulator