PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25163
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 271aa    MW: 29206.7 Da    PI: 7.5306
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25163genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.76.6e-25104162258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnh 58 
                Dg+ WrKYGqK+++gs++pr YYrC+ +  gC+++++v+rs+e+p +++i Y geH++
  EMT25163 104 ADGFVWRKYGQKDINGSNHPRLYYRCALSgeGCRATRRVQRSQEEPAAFVIAYYGEHTC 162
               6*************************999889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-2594163IPR003657WRKY domain
PROSITE profilePS5081122.12598165IPR003657WRKY domain
SuperFamilySSF1182903.4E-2399163IPR003657WRKY domain
SMARTSM007742.6E-30103164IPR003657WRKY domain
PfamPF031061.3E-23105162IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MALATPTAVV LELMTMGQQS AAHLRDLLRA ASPPVQAEHQ ALAAEILRCC DRVIAAVSAG  60
AADKKRKAAD PGATSCHPPM AAMPSKRRVR GAEAHREVHA DTTADGFVWR KYGQKDINGS  120
NHPRLYYRCA LSGEGCRATR RVQRSQEEPA AFVIAYYGEH TCGAALCQQR AEPLPPTVVD  180
SGSNAWGVFG AVDRNRGSPL LPSLGAEQGA VRRHVEAPGD TSRRWSSPSS SSSYSSEVEL  240
GASPVEGFLD GNFDWEWETV VNSLSFRDLL H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-151051621068OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186011.10.0probable WRKY transcription factor 38
TrEMBLA0A3B6H0P40.0A0A3B6H0P4_WHEAT; Uncharacterized protein
TrEMBLA0A453FTU60.0A0A453FTU6_AEGTS; Uncharacterized protein
TrEMBLM8BTM00.0M8BTM0_AEGTA; Putative WRKY transcription factor 46
STRINGEMT251630.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80590.11e-17WRKY DNA-binding protein 66