PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT25252

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

WRKY

Protein Properties

Length: 375aa MW: 40302.6 Da PI: 5.9954

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT25252	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	23.1	1.4e-07	117	136	2	21
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 +Dgy+W+KYGqK++k+ +f+ EMT25252 117 KDGYKWKKYGQKNIKNRKFA 136 7***************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	6.8E-19	108	198	IPR003657	WRKY domain
SuperFamily	SSF118290	1.7E-12	112	197	IPR003657	WRKY domain
SMART	SM00774	2.1E-19	116	198	IPR003657	WRKY domain
Pfam	PF03106	7.9E-15	117	197	IPR003657	WRKY domain
PROSITE profile	PS50811	10.097	118	180	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence Send to blast
MAFQQEAVGK LWEELGHGYN LSAKLLALLS QPGHLLDSHG QEMAVAISQE LSQVFRASLS 60 MLNPGNSGRV VEGRATAPEA AIMEGSISQA TPAIISGEEV TPPRIGKEEE ITAEPYKDGY 120 KWKKYGQKNI KNRKFASGIF VSDLTVNKLS TNKRLYFRCM HSHERGCRAK KQVQQQDNSI 180 GNPPLYKVTC LNEHTCHQAF PNVNITNANL AATSTTTRNG ADYDPARGHL HVGGNGELED 240 RIMTSTFSTV IGGAALAAPS LSPVPSPPPV EASPSGPASY DTGGGQSPSL LDLSMCLDET 300 MMDEMYFSCG SPFPPVEANA APWSLSSLPP PPPPMEASSI DPAAYMPPRC GHSLSLDAMT 360 MAEIFLWSSP LFSPR

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence Send to blast

MAFQQEAVGK LWEELGHGYN LSAKLLALLS QPGHLLDSHG QEMAVAISQE LSQVFRASLS  60
MLNPGNSGRV VEGRATAPEA AIMEGSISQA TPAIISGEEV TPPRIGKEEE ITAEPYKDGY  120
KWKKYGQKNI KNRKFASGIF VSDLTVNKLS TNKRLYFRCM HSHERGCRAK KQVQQQDNSI  180
GNPPLYKVTC LNEHTCHQAF PNVNITNANL AATSTTTRNG ADYDPARGHL HVGGNGELED  240
RIMTSTFSTV IGGAALAAPS LSPVPSPPPV EASPSGPASY DTGGGQSPSL LDLSMCLDET  300
MMDEMYFSCG SPFPPVEANA APWSLSSLPP PPPPMEASSI DPAAYMPPRC GHSLSLDAMT  360
MAEIFLWSSP LFSPR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020186003.1	0.0	WRKY transcription factor SUSIBA2-like
TrEMBL	M8CDQ8	0.0	M8CDQ8_AEGTA; Putative WRKY transcription factor 70
STRING	EMT25252	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13243	26	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	2e-16	WRKY DNA-binding protein 70