PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25485
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 364aa    MW: 39842.4 Da    PI: 7.4337
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25485genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.5e-10178225355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + h ++Er+RR+++ + f  L +++P       kK +K + L  +++Y+k+L+
  EMT25485 178 QEHVIAERKRREKLQQQFVSLATIIPGI-----KKTDKLSLLGSTIDYVKQLE 225
               5799**********************97.....7*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.126175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-8178225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-14179242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-14179236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.33E-8180229No hitNo description
SMARTSM003535.1E-11181230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MTGRRSRNES SGEENAVIKI LLVQAVMEQP NQWLAQTMVR VNGIALQEEE LVYMYQQEGG  60
HVPLPLPGME QQFAEPPLAD HQERYYTPPM AVPPFNPSRS SNFPSFGGSS SLPNLPFGSV  120
LVEIEPGQPS QQPSTNFLSF GSTLNFSEGA CWRHDGAQGT MQQLQVPQRR GRAAANAQEH  180
VIAERKRREK LQQQFVSLAT IIPGIKKTDK LSLLGSTIDY VKQLEEKVKV LDEQGSRRSS  240
ESMVFDSKCH ISAADNGAAG PSGSGSGYSS PDIEASILGN TALLSICCRG RKGVLVMVLS  300
ELENQGLSII NTNVVPFTNS YLNITIIAKA MAPLPSYPTL CKCVITCERT NRDLLLARRI  360
LMHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183188ERKRRE
2184189RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197262.11e-173transcription factor bHLH18-like
TrEMBLM8BKG00.0M8BKG0_AEGTA; Transcription factor bHLH25
STRINGEMT254850.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64013149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.26e-31bHLH family protein