PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25648
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 340aa    MW: 36130.7 Da    PI: 9.7579
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25648genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00017193215223
               EETTTTEEESSHHHHHHHHHH.T CS
   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
               +C+dC++ F   ++L+ H  t H
  EMT25648 193 PCSDCDEFFVKAESLELHRATrH 215
               6******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280194215IPR007087Zinc finger, C2H2
SuperFamilySSF563991.61E-5217339No hitNo description
Gene3DG3DSA:3.90.228.108.9E-5222339IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MDATAAGKKM SIGGEKKEQR KSGSSFWGAM ALKSRSQPAG AVESKNSRSE RKTTTTTTKR  60
SVSSIGRSMT CPGSICGTKE SAVLSRESCR NGGRNVSSSS RSLKAPDNDI LSVPVVASGA  120
VVSASSSFNS ETSVATTATT ASSSSSSSSA LSSPLSSIVA GSRSFRKLSG CYYECHSVLD  180
PRTRLVGGAG MLPCSDCDEF FVKAESLELH RATRHAVSEL GAEDTSRNVV EIIFQSSWLV  240
GKPRAAPICR IERILKVHSS GKTVERFEQY RERVKANAAS STDELARRSF PRCAADGNEI  300
LRFHCTTFTC SLGLAGATSL CGSSPQHCKL CSIIRDGFRY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2508620.0AK250862.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf100a05, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020154431.10.0uncharacterized protein LOC109739792
TrEMBLM8BUZ30.0M8BUZ3_AEGTA; Uncharacterized protein
STRINGEMT256480.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26333880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.15e-58C2H2-like zinc finger protein