PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25794
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 149aa    MW: 17166.5 Da    PI: 7.5723
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25794genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00122244123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              y+C+ C+++F++      H+ +H
  EMT25794 22 YTCSFCPRTFTNLQARGGHMTKH 44
              9**********998877777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002802444IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MATGPHGSWR SNETPMIPSP LYTCSFCPRT FTNLQARGGH MTKHRQEVLE NRRKHEEYMA  60
KKSKEFSMDP LSPNMAYWRR YRKGKEKPEE IIFFPIQMSR ELSEDDGGSS NVPMPYGSVA  120
TNTSMMLTVE DKEKGDQDEN LSIDLTLKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3B6THM11e-109A0A3B6THM1_WHEAT; Uncharacterized protein
TrEMBLA0A453REN51e-109A0A453REN5_AEGTS; Uncharacterized protein
TrEMBLM8BV311e-109M8BV31_AEGTA; Uncharacterized protein
STRINGEMT257941e-109(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2080966
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-07zinc-finger protein 10