PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26093
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 1143aa    MW: 130436 Da    PI: 6.9113
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26093genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.8e-14318403397
               EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                +l++++ +++  +++p  f  ++ +   ++ +++l+ +sg++W v+l   k sg+  +++GWkeF +++++  g  +vF++dg+s+f   v+vf
  EMT26093 318 RALISNSFMEH--VTIPAGFH-KYLE--DCTGMVSLRGPSGNKWPVEL--AKISGELCFARGWKEFLSDHRVGYGYLLVFRYDGQSQF--SVTVF 403
               55544444444..67887776.5543..47779***************..**********************************9999..66655 PP
2B346.85.3e-15738826290
               EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
        B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
               +k+++++dv +s  +++p kf++++   +ees+++t+ d++g+ W+v + y+++ +    +++GW   + +n+L+  D+++F+l ++  + 
  EMT26093 738 VKTMKHNDVYASYFMIIPDKFVKTFL--PEESRKMTFWDPQGKPWKVWYEYTGGECPrAAFSAGWGALAMENNLEKWDVCIFELLDQeYNI 826
               699*******************8884..45788****************99555554599***********************87532333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077277.9E-12156IPR013103Reverse transcriptase, RNA-dependent DNA polymerase
Gene3DG3DSA:2.40.330.105.1E-19309407IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.16E-18311408IPR015300DNA-binding pseudobarrel domain
CDDcd100173.53E-15314403No hitNo description
PROSITE profilePS5086311.617314406IPR003340B3 DNA binding domain
SMARTSM010193.0E-9316406IPR003340B3 DNA binding domain
PfamPF023626.4E-12317402IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.2E-20729831IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.16E-19730831IPR015300DNA-binding pseudobarrel domain
CDDcd100171.00E-21735832No hitNo description
SMARTSM010197.7E-11737834IPR003340B3 DNA binding domain
PROSITE profilePS5086312.323737834IPR003340B3 DNA binding domain
PfamPF023627.4E-13738828IPR003340B3 DNA binding domain
PfamPF048271.3E-808831083IPR006912Harbinger transposase-derived protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds
Sequence ? help Back to Top
Protein Sequence    Length: 1143 aa     Download sequence    Send to blast
MTEEFEMSMI GELTFFLGFE VKQRRGGTFI NQAKYTQDML KRFNLDDVKL VKFPMPTKCK  60
LDIDPNGKAV DQKPPVAVSL APVCPPALQI CGSLSNSLRG GLVLPDLFPW TPYNATFLFS  120
CDNRCVDSYA IPFLSQGKDE REVHAISKGP IMVRHQKQCN TMGMVDNKKN VKVKEEKDEN  180
INTKEKRKQK KAEGDKKTEE KQNSSERKMT KNKEEKEKKM RVVDKKDDEE KEREDQRKRK  240
ENGRKAMSHK ERKEENGNEK EEQGQEGKEG EIEKEKEEEQ KEINEQKGRK ENGKEEHDSK  300
ERDEEDQNDK QNCPHFFRAL ISNSFMEHVT IPAGFHKYLE DCTGMVSLRG PSGNKWPVEL  360
AKISGELCFA RGWKEFLSDH RVGYGYLLVF RYDGQSQFSV TVFLPSSCEA PYASLAQPQH  420
KDIDVAREEE KGLISTNVDD TVPQEDARSG TSVDGTPQNE ASEVEEDASE DEEAEEVEDA  480
LSETPENEQD YERRMSSNDA LEPEQQQQDD QHKTDDGFVV GKRARFRKLD DIMAEVDRSK  540
KSRPTEGKNS EAPSGDPASG GTSSSDSLAE SEHRPPMKSK AEEIRSPSGD SASKAAASSD  600
NLAELASRPS KDSKAEGKSS TAPLIFYTRS TASASKRVPL KKASKETTSS DNWAGVFTPE  660
SMCTDLTTWH KSFGKRLSKQ NQFPMFNKSN GENQPGRVLI KVMRRPGLTS QGRPVTEREK  720
EYAMERAQRF KSERPFTVKT MKHNDVYASY FMIIPDKFVK TFLPEESRKM TFWDPQGKPW  780
KVWYEYTGGE CPRAAFSAGW GALAMENNLE KWDVCIFELL DQEYNIKLHV YKVVLEITPC  840
VIAPKPLIVF GLLVDDHLAM GESQAIMCVK RFAVGIVQVF GPEYLRSPNT KDAGRLLEMN  900
KARGFPGMLG SIECMHWSWK NCLKAWHGQF HGQKKGSIII LEPVVDQETW IWHTFFGMPG  960
SLNDINVVNW SPLMNNIANG ELPPVQFVAN RHTYSYGYYL VDVIYPKWQT FVKPLKKPEG  1020
KKNLDFHNAQ AAAGKDVERV FGILLAQFAI VGRPARFWDQ KILWYIMHAC VIMHNMIIEN  1080
ERGQDSDYSQ YELLGHPVRV RRRAARVARF VASYHAIRRA ETHDDFRKDL IKEWWAWNGR  1140
QNA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230239KEREDQRKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167812.10.0uncharacterized protein LOC109753320
TrEMBLM8BW800.0M8BW80_AEGTA; B3 domain-containing protein
STRINGEMT260930.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2264526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.13e-14B3 family protein