PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26157
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 292aa    MW: 31231.7 Da    PI: 8.938
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26157genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.8e-10881281055
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               r R + +N ++  Lr+++P+      +K++K++iL+ A+eYI++Lq
  EMT26157  88 RLRGRTLNGKLYALRSVVPNI-----TKMDKVSILRDAIEYIHQLQ 128
               667789**************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.9678127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-1481143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-1184133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1385143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.54E-1187132No hitNo description
PfamPF000108.5E-888128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MGDSLDYSVC LEAQERPRYE LTGQRMKRTE AEPTDLDCSM HGGGSGSRVS GGYNGYWNWS  60
SPDTGYSSSP VVSAAVSASK SNVVVTRRLR GRTLNGKLYA LRSVVPNITK MDKVSILRDA  120
IEYIHQLQEQ ERRMLAEISL LESAAEVHGH AQLLAATLQP VLPNGCAGHA MPPVKKTRGP  180
LSFPSAVTPA PASAMAVASP PVEIVEVRVT GAGDKLLVVS VACRHRKDAM GKVCRAFESL  240
RLAVISANVT VASGTVTHTA LLQRQEIHKS EMKGLIETAI AHVDVAGSSI SY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184164.10.0transcription factor bHLH35-like
TrEMBLA0A453GEC80.0A0A453GEC8_AEGTS; Uncharacterized protein
TrEMBLM8CG560.0M8CG56_AEGTA; Transcription factor bHLH35
STRINGEMT261570.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-30bHLH family protein