PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26494
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family Trihelix
Protein Properties Length: 234aa    MW: 24651.7 Da    PI: 4.4091
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26494genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix431.2e-131441760
  trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkr 60
              m+ ++r+++lk+p Weevs+k++e g++rs+k+Ckek+en+ +r
  EMT26494  1 MDGAFRNAALKAPVWEEVSRKLAELGYRRSAKKCKEKFENVDNR 44
              68899***********************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd122032.42E-15144No hitNo description
PfamPF138379.7E-9544No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MDGAFRNAAL KAPVWEEVSR KLAELGYRRS AKKCKEKFEN VDNRPEAPKP CPSSPQLDAI  60
YRKKQSAVSN AAAGCSSTAF GNAVGAVNAS ASEQHNPWRE LEGKISNDFD RRHSVGGGSS  120
DAPPGDGEVA AASTVLDAIA TNKKSEDNVM AMESNIQSQQ TEVTATDETD SDDIEGNYSD  180
DGDDDGDEDD KMKYTIEFQK HKEGGSGSAP AAPATAATVV TSSAPTGSTF LAVQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3754941e-108AK375494.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3095N08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184216.11e-115trihelix transcription factor GTL1-like
RefseqXP_020184217.11e-115trihelix transcription factor GTL1-like
TrEMBLM8BX071e-171M8BX07_AEGTA; Uncharacterized protein
STRINGEMT264941e-172(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60638175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.25e-17Trihelix family protein