PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26905
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family M-type_MADS
Protein Properties Length: 190aa    MW: 21503.8 Da    PI: 9.1161
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26905genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.42.8e-111151343
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              i ++  r+ t  kR  gi KKA ELSvLC+++ + i++ + 
  EMT26905 11 IASDPTRKATARKRDMGIKKKAGELSVLCGVDTCYIMYREG 51
              778889999****************************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006615.082152IPR002100Transcription factor, MADS-box
SMARTSM004328.5E-9161IPR002100Transcription factor, MADS-box
CDDcd002667.08E-24286No hitNo description
SuperFamilySSF554556.8E-19396IPR002100Transcription factor, MADS-box
PRINTSPR004045.1E-5323IPR002100Transcription factor, MADS-box
PfamPF003191.3E-101152IPR002100Transcription factor, MADS-box
PRINTSPR004045.1E-52338IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MARKKVAIEY IASDPTRKAT ARKRDMGIKK KAGELSVLCG VDTCYIMYRE GGASPPEVYP  60
SVPEAMRVID RFRSMPELDQ CKKKMDGEDY VRERIAKIQE QLRRAQRDNR QLETTLLLHD  120
TLVGRRQGLA GVAIEQLVSL GWMAESYVKK VSDCIAYRNM QQQQHAGVQA EPPHYGATVA  180
DMEAPPHQQL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190655.11e-140agamous-like MADS-box protein AGL80
TrEMBLA0A453ECQ21e-139A0A453ECQ2_AEGTS; Uncharacterized protein
STRINGEMT269051e-139(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36336202
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.14e-34AGAMOUS-like 80