PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26970
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 507aa    MW: 54921.8 Da    PI: 6.8294
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26970genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57337.85.3e-12161247597
    DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisf.kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               r w+ eDei +L +l+   + +g++      +++  v +s++  +v+k+++ eK+r+++++++k v++   g     +k++d   f+ls+++Wg
  EMT26970 161 RRWTTEDEIKILEALVRHVKANGTQ--PGARELIAAVGGSLERkNVTKTEMYEKVRNIRQRYEKAVST---G--ALPEKDDDLRKFKLSEQVWG 247
               78****************9999976..57799*********86269********************99...3..44567889999********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-17160247IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MGRKSRQPSP PPPPPPEEES SAEEEEEEAA AEATPATQNS PQPPSAATAA DAEADADSSD  60
GSDEESSESG KIDAEAFELR QIASSKLESD AGEPTPPAKD KKKGRSLAEP SPSGTAKKAK  120
AGVAEKALSE LTPSSEGKKK RKAQPEKTAP WNKLEKPGHP RRWTTEDEIK ILEALVRHVK  180
ANGTQPGARE LIAAVGGSLE RKNVTKTEMY EKVRNIRQRY EKAVSTGALP EKDDDLRKFK  240
LSEQVWGENA KQVAAATMAQ NEAASLKGKK KEQTSKEKTE GHSKGGTAKE VTASADETEG  300
YSKGGTAKQA TDEKVEEDSK GRSSKKASTA DTPAKSRKRG NHKEELEGDA KTGTTKETVD  360
TTTQNGGTLV RSKSGKSDKE KADGDAESPM PKEAMADAKN GGTLALFKKE GKTHEEKMDT  420
DANARGTRKG FEELQKFYPN LTSYVEDIQA QHPCGETLKR AFEFIPDEKA CALESKIKRQ  480
RVAELRMEMR RSDTKKEVTN IFIGLLD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1475480KIKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193496.10.0triadin-like
TrEMBLM8BPM40.0M8BPM4_AEGTA; Uncharacterized protein
STRINGEMT269700.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72892737