PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26974
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 343aa    MW: 37118.4 Da    PI: 8.2854
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26974genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.61.9e-12154199454
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h + ErrRR+r+N++f++Lr llP+       K +Ka +L  ++eY+ +L
  EMT26974 154 HHVISERRRRERLNDSFQTLRALLPPG-----SKKDKANVLASTTEYMAKL 199
               58899********************95.....599************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.097150199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.11E-16151217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.60E-11152203No hitNo description
Gene3DG3DSA:4.10.280.101.6E-15153217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-10155199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-12156205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MDSVFALAAV PRALVLERAA ARVPGCLYLC LWAPFIVLLA SHLFCLDAWI GGGGGGGGSR  60
ARASFEAYRG ALCAVVSGCV PGWAYREGRA YMELPEPDLT ASASLQVQQQ FYHRMIKTCI  120
SLLASVHMAM RNRPEHATAR REDSSAPSTT SQLHHVISER RRRERLNDSF QTLRALLPPG  180
SKKDKANVLA STTEYMAKLV SQVTQLRERN LQLEAQLGLN QSASDDNPSG KTVEVEVTTG  240
ASTSTSTAPS QQPREVSVRV TVRAECDMSE VLTSLLARLK DTGSFAVVSV EARQQSSALA  300
RASLTLRMTV GDVVDEAWLE EALAKVVEDA VMKTPPVPPP RSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3616660.0AK361666.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1146D10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020154236.11e-138putative transcription factor bHLH041
TrEMBLM8BYA90.0M8BYA9_AEGTA; Uncharacterized protein
STRINGEMT269740.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39773367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-22bHLH family protein