PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26998
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 587aa    MW: 65963.2 Da    PI: 6.7185
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26998genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.4e-11233318998
               HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                +lk + + lp k +e+++++ +++ t++le ++ + + v+   +k+++  +vl+ GWk+ v+an+++e+D ++F  +g  +++l v+++ 
  EMT26998 233 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDNIYGVEA--CKHGDDqIVLQYGWKNLVDANRIQENDLLIFITKG--KKRLEVRILG 318
               45678999*******777666.5678****************..5555545*************************655..5556887765 PP
2B333.67.1e-114965821499
               T-EE--HHH.HTT..---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  14 grlvlpkkfaeeh..ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               + l + +++ +++    + ++ + l+l++e +   +  +v +  +k++ r ++++GWk+Fv +n+++egD+ +F++ ++ +e +++v ++rk
  EMT26998 496 SHLGFRREYGSRYipH-I-NRRMRLVLQSEGSttgQPATVVI--DKNGMR-WIRGGWKRFVAENDVQEGDIALFERAKStKELRMTVYFVRK 582
               3477777777777532.3.35677888876653336666666..888766.89**********************99877999999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010191.355145IPR003340B3 DNA binding domain
SuperFamilySSF1019361.82E-1162146IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.2E-966146IPR015300DNA-binding pseudobarrel domain
CDDcd100171.93E-768143No hitNo description
PROSITE profilePS508636.132108145IPR003340B3 DNA binding domain
SuperFamilySSF1019362.75E-15217319IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.7E-15218319IPR015300DNA-binding pseudobarrel domain
CDDcd100174.69E-12222317No hitNo description
SMARTSM010195.9E-6224320IPR003340B3 DNA binding domain
PROSITE profilePS508639.883225320IPR003340B3 DNA binding domain
PfamPF023621.3E-8232316IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.2E-12476579IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.53E-12477582IPR015300DNA-binding pseudobarrel domain
CDDcd100174.01E-8482578No hitNo description
PROSITE profilePS508638.896483583IPR003340B3 DNA binding domain
SMARTSM010193.9E-4484583IPR003340B3 DNA binding domain
PfamPF023624.1E-9487582IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MWRQHYHRGH TGHDKEHFFA VASGDFTHPQ YGQLTWPFLP SIHFFSCACS LLQSFIISAI  60
SNLIDINLCI PWEVGDHLGS MISETITLEA PNGIFCIGVC RKAGELVLQS AWDKFVAMHH  120
IEENYSFWFV CPGNSTFKVH IFNPNGHEKA SSCSQPPSQS FGGVPPGAIC DHHAPNEQLL  180
SDPGHVRTST DYGYSTLPGC HLTKAQDEKV REIACTMRSQ VPLYVAVMNK SNVNLKDCSV  240
NLPLKLVEHF KEDTSKATIQ LEAPNDNIYG VEACKHGDDQ IVLQYGWKNL VDANRIQEND  300
LLIFITKGKK RLEVRILGTS VHQRTSSCFD LGNISSTQEI CEDSLEITDP PPHTDYYVSS  360
SDDDHIVEEG TRKSCYYVSS SDDDHIVEEG YYVSSSDDDH IVEQGTRKSF YYVSCSDAHD  420
IVEEGTRKSC RRQKQAPSHC AKAQKVASTS SPSAAKSGRT PLTSVEKKKV EEKVQAIQSE  480
LPIYVSLMTK SRINASHLGF RREYGSRYIP HINRRMRLVL QSEGSTTGQP ATVVIDKNGM  540
RWIRGGWKRF VAENDVQEGD IALFERAKST KELRMTVYFV RKSDIEV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BYY50.0M8BYY5_AEGTA; B3 domain-containing protein
STRINGEMT269980.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16378713
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-08B3 family protein