PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27140
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family FAR1
Protein Properties Length: 199aa    MW: 22720.8 Da    PI: 9.3468
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27140genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1301.8e-09130173146
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekk 46 
               +fY++YA++vGFsvr+ ++k+   ng it+++f+  +eg++ee+k 
  EMT27140 130 DFYEAYAHHVGFSVRVGQHKTG--NGVITHNRFYFDREGFHEERKG 173
               6****************99988..******************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.2E-7130173IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MGSLDPSRYI FYALASLRWY HVRYKAEEIV KDLIARTPEF NDQLRLPNCR DRPHHTLPIG  60
SWRPAIVANS SPAFPHLRRL AQHANHPLSI PHRIGTGSNK SQGSSYTPEC DDDIRPAIGM  120
TFMDLKAAKD FYEAYAHHVG FSVRVGQHKT GNGVITHNRF YFDREGFHEE RKGLLVAVKT  180
CEGFINKDYC RMFGVAVVH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-62HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BQ571e-148M8BQ57_AEGTA; Uncharacterized protein
STRINGEMT271401e-149(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15006915
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.13e-08FAR1-related sequence 12