PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27315
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 291aa    MW: 30682 Da    PI: 7.0912
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27315genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.13.2e-22102162259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               +Dg +WrKYGqKe+++s+++++Y+rCt++   +C+++++ +r+++dp+++ +tY g H+++
  EMT27315 102 EDGQTWRKYGQKEIQNSKHSKAYFRCTHKydqQCMARRQAQRCDDDPDTFRVTYIGVHTCR 162
               8***************************99999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-2392164IPR003657WRKY domain
PROSITE profilePS5081119.01596164IPR003657WRKY domain
SuperFamilySSF1182902.48E-2396164IPR003657WRKY domain
SMARTSM007744.4E-32101163IPR003657WRKY domain
PfamPF031061.8E-20102162IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAPYEKVMDD LAKGQQFATQ LQGLLRDSPK AGHIMDQILH TFSRAIHAAK AAAAASASES  60
EVTDGASSGG KRKSAAGGGP RKACRTRTQD SSVVTKNMKS LEDGQTWRKY GQKEIQNSKH  120
SKAYFRCTHK YDQQCMARRQ AQRCDDDPDT FRVTYIGVHT CRDPAAAVAP HAPHLTGTAA  180
GCHLISFAPA AAHGTTTSTT TTNTNLVDDA AATGSGLQLP GLKLEGGDLE EVLSSRTPGS  240
SALYGAAAAA AWPDQGDVTS TLQYGGAGAF GGGLFDGYPY LEDLLSYDLD H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-3491162169OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3976130.0EF397613.1 Triticum aestivum cultivar Nongda 3338 WRKY45 transcription factor (WRKY45) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165252.10.0probable WRKY transcription factor 70
TrEMBLM8BQP30.0M8BQP3_AEGTA; Putative WRKY transcription factor 70
STRINGEMT273150.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-16WRKY DNA-binding protein 70