PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27463
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 211aa    MW: 21642.5 Da    PI: 6.7169
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27463genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000245274123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              y+C  C++ F++   L  H++ H
  EMT27463 52 YECVFCKRGFTTAQALGGHMNIH 74
              99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.27E-64878No hitNo description
PROSITE profilePS5015710.995279IPR007087Zinc finger, C2H2
PROSITE patternPS0002805474IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051973Biological Processpositive regulation of telomerase activity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MASGSNKEPT VASGDEAASS AAGPPGVAAP PPQGAEPGGD KAGGAGVGRP YYECVFCKRG  60
FTTAQALGGH MNIHRRDRAK PSVRDAPSGT TTSASPNVEC YNQYYSHHLP YPTVPPATAT  120
PMSTSGSFTL AYYQHQGTGA STGDAHADAS VNPSSASPRE LSLFGAAARD RDSHGRGGDG  180
SGVAPEGSDR QAGEPPEREI DLELRLGRRP H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187562.11e-115uncharacterized protein LOC109773281
TrEMBLM8C0A11e-149M8C0A1_AEGTA; Putative transcriptional regulator RABBIT EARS
STRINGEMT274631e-150(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81112736
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.17e-14C2H2 family protein