PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT29554

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 85aa MW: 9962.2 Da PI: 11.4243

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT29554	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.6	5.5e-13	1	41	10	50
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++kNRe+A rsR+RK+a++ eLe + ++L eN++L+++ + EMT29554 1 MIKNRESAARSRARKQAYTNELELELEQLRRENQMLIQREK 41 68**********************************98755 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	9.094	1	39	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.4E-10	1	42	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.38E-10	1	42	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-11	1	41	No hit	No description
SMART	SM00338	0.0054	1	56	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 85 aa Download sequence Send to blast
MIKNRESAAR SRARKQAYTN ELELELEQLR RENQMLIQRE KDFINDRQAK AAQLAVPDRR 60 SGRNTASSLQ QKQQQQQRCR SAPPP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK375836	5e-54	AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020164610.1	6e-53	bZIP transcription factor 27-like
TrEMBL	A0A3B6DLP0	2e-51	A0A3B6DLP0_WHEAT; Uncharacterized protein
TrEMBL	A0A453D4K6	8e-52	A0A453D4K6_AEGTS; Uncharacterized protein
TrEMBL	M8C5K4	2e-52	M8C5K4_AEGTA; Protein FD
STRING	EMT29554	4e-53	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14602	10	20