PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT29878

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

BES1

Protein Properties

Length: 355aa MW: 37495.3 Da PI: 8.0398

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT29878	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	185.8	1.7e-57	24	161	12	147
DUF822 12 rEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslqsslkssalaspvesys 111 rEnn+rRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGwvve+DGttyr+g+kp+ ++ +sasasp+ss+q +sp++sy+ EMT29878 24 RENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRRGCKPPpQARTDPMRSASASPCSSYQ--------PSPRASYN 116 9**************************************************************88889999********........**** PP DUF822 112 aspksssfpspssldsislasa.........asllpvlsvlslvs 147 +sp+sssfps+ s+++i+l +sl+p+l++ls+ + EMT29878 117 PSPASSSFPSSGSSSHITLGGGnnfiggvegSSLIPWLKNLSSNP 161 ***************9987678999999999999999998744 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.7E-62	24	158	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence Send to blast
MADPAAGAGG AERERRAGGR HGLRENNRRR ERRRRAIAAK IYTGLRAYGN YNLPKHCDNN 60 EVLKALCNEA GWVVEPDGTT YRRGCKPPPQ ARTDPMRSAS ASPCSSYQPS PRASYNPSPA 120 SSSFPSSGSS SHITLGGGNN FIGGVEGSSL IPWLKNLSSN PSFASSSKLP QLHHLYFNGG 180 SISAPVTPPS SSPTHTPRMK TDWESQCVLP PWAGANYASL PNSTPPSPGH HVAPDPAWLA 240 GFQISSAGPS SPTYNLVSHN PFGIALASSS RVCTPGQSGT CSPAMGDHAP AHHDVQMEMV 300 EGAADDFAFG SNSNGNNGSP GLVKAWEGER IHEECASDEL ELTLGSSRTR GEPPF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence Send to blast

MADPAAGAGG AERERRAGGR HGLRENNRRR ERRRRAIAAK IYTGLRAYGN YNLPKHCDNN  60
EVLKALCNEA GWVVEPDGTT YRRGCKPPPQ ARTDPMRSAS ASPCSSYQPS PRASYNPSPA  120
SSSFPSSGSS SHITLGGGNN FIGGVEGSSL IPWLKNLSSN PSFASSSKLP QLHHLYFNGG  180
SISAPVTPPS SSPTHTPRMK TDWESQCVLP PWAGANYASL PNSTPPSPGH HVAPDPAWLA  240
GFQISSAGPS SPTYNLVSHN PFGIALASSS RVCTPGQSGT CSPAMGDHAP AHHDVQMEMV  300
EGAADDFAFG SNSNGNNGSP GLVKAWEGER IHEECASDEL ELTLGSSRTR GEPPF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	4e-25	36	89	391	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	4e-25	36	89	391	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	4e-25	36	89	391	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	4e-25	36	89	391	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK360181	0.0	AK360181.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1112F17.
GenBank	AK366794	0.0	AK366794.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046O02.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020152195.1	0.0	protein BZR1 homolog 3-like
Swissprot	Q5Z9E5	1e-173	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	M8C751	0.0	M8C751_AEGTA; Uncharacterized protein
STRING	EMT29878	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	4e-68	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]