PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29895
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 250aa    MW: 28400.1 Da    PI: 10.334
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29895genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57338.63e-1257147397
    DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               ++r w  +De+++L +li  + ++   p    ++f++ + ++++ +  +  q+ +K+++L +++     +       + s++hd+   +ls  iWg
  EMT29895  57 VRREWAASDEVTILEALIAHRRQHRELPERSNNDFFQALAERLEDTSRQpLQIKDKVKSLERRYFSPTGH-----RRASSSSHDKRLNQLSAEIWG 147
               6789*******************999*****************97766526**************98877.....778999**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.4E-1558147IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MAKPAAPPPP SSPQTSSHLY LLTQSQHQDT DPEVEQPRPD DDVDDADDEP AKKRARVRRE  60
WAASDEVTIL EALIAHRRQH RELPERSNND FFQALAERLE DTSRQPLQIK DKVKSLERRY  120
FSPTGHRRAS SSSHDKRLNQ LSAEIWGDLP LGDDGSAHVG NNGGGDRRAK MCKMFPLVAQ  180
KVNDLAHLQP AVKRLFPSLA DAPLRLLENR LEKIRWSEMN IDVRLERMLL RASKRASTTR  240
ASKTVSKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BY240.0M8BY24_AEGTA; Uncharacterized protein
STRINGEMT298950.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2906823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.19e-09DNA-binding storekeeper protein-related transcriptional regulator