PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT31998
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 136aa    MW: 14433.5 Da    PI: 10.231
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT31998genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000824365123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ Cg+sF++   L  H  +H
  EMT31998 43 FVCKACGRSFPSFQALGGHRTSH 65
              89**********99998888777 PP
2zf-C2H217.41.2e-0597119123
               EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
               ++C++Cg+ F +   L  H+r+H
  EMT31998  97 HRCHICGQGFETGQALGGHMRRH 119
               79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.02E-74265No hitNo description
SMARTSM003550.144365IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-104367IPR007087Zinc finger, C2H2
PROSITE profilePS501579.8894365IPR007087Zinc finger, C2H2
PROSITE patternPS0002804565IPR007087Zinc finger, C2H2
SuperFamilySSF576673.02E-792119No hitNo description
SMARTSM003550.01897119IPR015880Zinc finger, C2H2-like
PfamPF139121.6E-1097122IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.53397124IPR007087Zinc finger, C2H2
PROSITE patternPS00028099119IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MTKHQRAAAD QAVSLSLSLS LGAVAGLNKK VRRAAAAAGG DQFVCKACGR SFPSFQALGG  60
HRTSHLRGCH GLALALTTGD QYFSVKPKST TDQKSEHRCH ICGQGFETGQ ALGGHMRRHR  120
EEAAQAPPPV LLELFV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198424.13e-95zinc finger protein ZAT7-like
TrEMBLA0A453M9I46e-94A0A453M9I4_AEGTS; Uncharacterized protein
STRINGEMT319981e-94(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130530117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.17e-19C2H2 family protein