PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32039
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 811aa    MW: 91175.1 Da    PI: 7.4326
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32039genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-14299384899
               -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                + +  + lv+p  f++++ggk  +  t++le+++g+ ++v +  + + +r++l++GW  Fv+an+++e+ +++F++ g+ +f   v++f++
  EMT32039 299 INGNFMHSLVIPEWFVNQFGGKIWG--TVRLETSDGNMYDVGV--TESMNRTILKSGWATFVDANQIEENYSLMFRYLGNARF--EVTIFDS 384
               55556678***********999666..8***************..*********************************98888..9999986 PP
2B348.71.4e-157208081799
               E--HHH.HTT---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  17 vlpkkfaeehggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               +l  kfa+ h g k + + l+l+   ++r W  kl+y    r +s+++   kGW +F+++n+L+egD ++Fkl+++ ++ +++v ++r+
  EMT32039 720 YLGEKFAAGHHGGKCNAINLVLQReGKSRPWPTKLRYthvmRASSQQMRVIKGWPSFARDNRLREGDLCLFKLMENeEQLTMMVYIIRR 808
               6778999999556667788999884556*******9999*999999999999**********************999*********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.885292385IPR003340B3 DNA binding domain
CDDcd100173.60E-13294383No hitNo description
SMARTSM010191.7E-5295385IPR003340B3 DNA binding domain
SuperFamilySSF1019361.79E-16295388IPR015300DNA-binding pseudobarrel domain
PfamPF023624.8E-13296384IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.5E-16302386IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.1E-12487597IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.88E-11490600IPR015300DNA-binding pseudobarrel domain
CDDcd100171.52E-10493596No hitNo description
PROSITE profilePS508637.584495598IPR003340B3 DNA binding domain
SMARTSM010190.011495598IPR003340B3 DNA binding domain
SuperFamilySSF1019361.16E-11710811IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.4E-13710810IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.0028711809IPR003340B3 DNA binding domain
PfamPF023622.1E-13719808IPR003340B3 DNA binding domain
CDDcd100171.05E-12720807No hitNo description
PROSITE profilePS5086312.111739809IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 811 aa     Download sequence    Send to blast
MARSGSESYV SRSVNWDLIP VGLEEEMMAI EENANEENAR QQLDLIRCQS IASAQMVCGS  60
DPRQVVAAST EEVRSVWHLS VVADVRPFRW HASDKAICGT SAERMASETS LLQILVFGER  120
LLRDCSPWFN YFIYVDYFCV TFVFTMSTES DRAAAEKAAA DKRIADEADA SAAVNCLISQ  180
QLPQFAMGAY ELAWRYSASP AISFQSGIYG MNSVSIFPRR SFLSISKTTG SAFPCRFFYS  240
AATSSTGASR RGRVAALPRT RAEEDDRGGD AGHFGELNIS KMSNPCECCR IKLKFLRQIN  300
GNFMHSLVIP EWFVNQFGGK IWGTVRLETS DGNMYDVGVT ESMNRTILKS GWATFVDANQ  360
IEENYSLMFR YLGNARFEVT IFDSNGKENT WCCSGMRNAS GVHKPSSFDV DNSSSRGGTT  420
QSSASEGSDS DGSQKERSYS SEESSAEYNL SIDNPVESDD VRNYYVLSGK CDLTEAQELK  480
LHAFVQKIRP EIPMLVVLMK KSNVRHHGDL VIRKDYAHKY LPCKDTNIIL QLPRKNKIWE  540
CKFQIRPSGS TDAGRRNLSL GDFVGDNLVR EGDICLFEPM TNTKQKRFTM TVHILDKLSI  600
DHSPGRTTDI GSNHGRRCTK MGGVKTKPPI NGEEYSSQHE ECGVSDNSEE CSEPPFMLPH  660
RSCLTPAQEN KVLEKIKDIE SDSELPFYVA IMGKINVCRG SSHYIHPPIL NFGFRYAARY  720
LGEKFAAGHH GGKCNAINLV LQREGKSRPW PTKLRYTHVM RASSQQMRVI KGWPSFARDN  780
RLREGDLCLF KLMENEEQLT MMVYIIRREK C
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198703.10.0B3 domain-containing protein Os03g0619600-like
TrEMBLM8CCB30.0M8CCB3_AEGTA; B3 domain-containing protein
STRINGEMT320390.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.16e-18B3 family protein