PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT32548

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bHLH

Protein Properties

Length: 175aa MW: 19779.5 Da PI: 10.3514

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT32548	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.9	1.2e-05	77	99	9	30
HHHHHHHHHHHHHHHHCTSCC.C CS HLH 9 ErrRRdriNsafeeLrellPk.a 30 + RR riN+++ +L++l+P + EMT32548 77 SQERRTRINKRLRRLQDLIPYmD 99 589*****************855 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence Send to blast
MAQQRRLGSL WSFLRQQDVG ESIAAGNGSS DLLRIFSMST CDDTNSNIIF SAPGSKKAEV 60 LGDSDVGMVT SFSNIDSQER RTRINKRLRR LQDLIPYMDK VTRSMLLGLM QIGYSRHWHE 120 NGYSVPQALQ NNAQSNFSSG HDSLKLLSSI LKKRLTRING HALRKIAKEY EIFLE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	1e-74	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020176351.1	2e-60	uncharacterized protein LOC109761925 isoform X4
Refseq	XP_020176355.1	2e-60	uncharacterized protein LOC109761925 isoform X4
Refseq	XP_020176361.1	2e-60	uncharacterized protein LOC109761925 isoform X4
Refseq	XP_020176367.1	2e-60	uncharacterized protein LOC109761925 isoform X4
Refseq	XP_020176371.1	2e-60	uncharacterized protein LOC109761925 isoform X4
Refseq	XP_020176379.1	2e-60	uncharacterized protein LOC109761925 isoform X4
Refseq	XP_020176387.1	2e-60	uncharacterized protein LOC109761925 isoform X4
TrEMBL	M8CEB8	1e-126	M8CEB8_AEGTA; Uncharacterized protein
STRING	EMT32548	1e-126	(Aegilops tauschii)