PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32783
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 136aa    MW: 15734.6 Da    PI: 6.3507
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32783genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.12e-102164144
              TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHH CS
  Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqV 44
              r++ +++t+eq++ Lee ++k+ +p++ + ++L ++lgL+++q+
  EMT32783 21 RKRQRRHTPEQIQKLEESYKKSDHPNEIQCAQLGRELGLETKQI 64
              677889*************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-11865IPR009057Homeodomain-like
SuperFamilySSF466892.69E-8965IPR009057Homeodomain-like
PfamPF000465.2E-82164IPR001356Homeobox domain
CDDcd000861.45E-62164No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MDIGDHQQGG SDSQQQLQES RKRQRRHTPE QIQKLEESYK KSDHPNEIQC AQLGRELGLE  60
TKQIEHERLE NRFLRWENMS LRAEIMAVRE ALKNSATCPN CLGVAKDCID QQELNRENAR  120
LKAGLLHCTT SIQDEP
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169320.14e-84homeobox-leucine zipper protein ROC8-like
SwissprotQ69T587e-30ROC8_ORYSJ; Homeobox-leucine zipper protein ROC8
TrEMBLM8CF163e-95M8CF16_AEGTA; Homeobox-leucine zipper protein ROC8
STRINGEMT327835e-96(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.16e-22homeodomain GLABROUS 11