PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32784
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 149aa    MW: 17685.8 Da    PI: 6.131
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32784genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.27.6e-202176156
              TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
              r++ +++t+eq++ Lee F+k+ yp++++ ++L ++lgL+ +q++ WFqN+R+++k
  EMT32784 21 RKRQRRHTPEQIRKLEESFQKCGYPDEAQSAQLGRELGLENKQIRSWFQNHRTQMK 76
              566779***********************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-19859IPR009057Homeodomain-like
SuperFamilySSF466891.23E-17876IPR009057Homeodomain-like
PROSITE profilePS5007116.861878IPR001356Homeobox domain
SMARTSM003891.8E-151982IPR001356Homeobox domain
CDDcd000866.43E-142176No hitNo description
PfamPF000462.0E-172176IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.609.7E-460105IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MDMGDHQEGG SDSQQQLQER RKRQRRHTPE QIRKLEESFQ KCGYPDEAQS AQLGRELGLE  60
NKQIRSWFQN HRTQMKVEYE RAENLFLREE NTRLLSENMV MREVLKNFIC LNPNCIAKHY  120
IDQQEELDKE NARLKAGSLL CATSFQDEL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169319.11e-107homeobox-leucine zipper protein ROC8-like
SwissprotQ69T582e-41ROC8_ORYSJ; Homeobox-leucine zipper protein ROC8
TrEMBLA0A3B6TLS61e-106A0A3B6TLS6_WHEAT; Uncharacterized protein
TrEMBLA0A453R2I41e-106A0A453R2I4_AEGTS; Uncharacterized protein
TrEMBLA0A453R2Y81e-106A0A453R2Y8_AEGTS; Uncharacterized protein
TrEMBLM8CEG71e-106M8CEG7_AEGTA; Homeobox-leucine zipper protein ROC8
STRINGEMT327841e-107(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.11e-28homeodomain GLABROUS 11