PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT32903

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

CPP

Protein Properties

Length: 744aa MW: 79859.8 Da PI: 6.7175

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT32903	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.4	9.1e-16	456	495	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + EMT32903 456 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 495 689**********************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	3.1E-15	455	496	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	15.674	456	524	IPR005172	CRC domain
Pfam	PF03638	7.9E-12	458	493	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence Send to blast
MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDSSH NVHLFKSSDL APVSSIFASP 60 HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP 120 MDSSANRSNS TSKLPQTIQF VGDSSECGKN QNADSKKDLA RDQESIELEG VLLDHTGPDK 180 IDSSQPGRTV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCEAD TQLVNETLNA 240 DNVFSGNSLL TDGPSGSYIN NAAHDPNLYW DGTVEGPTTD YTPQLLPGAC QSQSVSNDQI 300 CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT 360 NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQSS INQASNFPCA VSSSTSEPNI 420 VNEDSSQAIV VANADESGQG SPKKKRHKFD DGDGTSCKRC SCKKSKCLKL YCECFHAGVF 480 CSEPCSCQGC LNKPSNMEIV LSTREQIESR NPLAFAPKVI RTSEPGQELG PLLLSRRLGG 540 LSLEILLLAI SIYQLLMVLL SIEGLGPLSI EEAKQGNEEN SACVKEEKKE DDNNQLVICP 600 AANPVPAENV LTTPSAMDVR PLASRPPSSS KRPRSTTKVL GHPSRLCNSQ APLKTDTLLS 660 PFENYAEIMF GVGTSDSLKG GLSPQTSVKV VSPNKKRVSP PRIGTGLSPI CKSGRKLILK 720 SIPSFPSLGG DVNNADTKTT LPAP

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence Send to blast

MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDSSH NVHLFKSSDL APVSSIFASP  60
HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP  120
MDSSANRSNS TSKLPQTIQF VGDSSECGKN QNADSKKDLA RDQESIELEG VLLDHTGPDK  180
IDSSQPGRTV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCEAD TQLVNETLNA  240
DNVFSGNSLL TDGPSGSYIN NAAHDPNLYW DGTVEGPTTD YTPQLLPGAC QSQSVSNDQI  300
CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT  360
NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQSS INQASNFPCA VSSSTSEPNI  420
VNEDSSQAIV VANADESGQG SPKKKRHKFD DGDGTSCKRC SCKKSKCLKL YCECFHAGVF  480
CSEPCSCQGC LNKPSNMEIV LSTREQIESR NPLAFAPKVI RTSEPGQELG PLLLSRRLGG  540
LSLEILLLAI SIYQLLMVLL SIEGLGPLSI EEAKQGNEEN SACVKEEKKE DDNNQLVICP  600
AANPVPAENV LTTPSAMDVR PLASRPPSSS KRPRSTTKVL GHPSRLCNSQ APLKTDTLLS  660
PFENYAEIMF GVGTSDSLKG GLSPQTSVKV VSPNKKRVSP PRIGTGLSPI CKSGRKLILK  720
SIPSFPSLGG DVNNADTKTT LPAP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK354434	0.0	AK354434.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1007E24.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020189110.1	0.0	protein tesmin/TSO1-like CXC 2
TrEMBL	M8CFB3	0.0	M8CFB3_AEGTA; Uncharacterized protein
STRING	EMT32903	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12746	26	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-30	TESMIN/TSO1-like CXC 2