PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32917
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family TALE
Protein Properties Length: 581aa    MW: 62810.9 Da    PI: 8.2426
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32917genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.33.3e-053463911954
               HHH..SSS--HHHHHHHHHHCTS-HHH........HHHHHHHHHHH CS
  Homeobox  19 Fek..nrypsaeereeLAkklgLterq........VkvWFqNrRak 54 
               Fe   ++yp+ ++++ LAk++gLt +q        V++WF N R +
  EMT32917 346 FEHflHPYPTDSDKQMLAKQTGLTRNQasnhfmfpVSNWFINARVR 391
               554459********************98888888899999999987 PP
2BELL94.11.3e-30212281372
      BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
               +e q +k++L+sl+eeV+krY+qy++qlq+vissFe+vagl +a+p++s+Al+++S+hF+ Lk  i +q+
  EMT32917 212 AEQQWRKTRLISLMEEVCKRYRQYYQQLQAVISSFETVAGLSNAAPFASIALRTMSKHFKYLKSTIQSQL 281
               58899**************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005748.3E-35140279IPR006563POX domain
PfamPF075262.6E-37145277IPR006563POX domain
PROSITE profilePS500718.762324395IPR001356Homeobox domain
CDDcd000861.00E-11327396No hitNo description
SMARTSM003898.4E-6327399IPR001356Homeobox domain
SuperFamilySSF466891.07E-12329402IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-25330399IPR009057Homeodomain-like
PfamPF059209.8E-17344391IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MSSAAGGYGG GAEHQHQQHH QHQLLLGQAA AGQLYHVPQH SRREKLRFPP DPADSSSPTP  60
GAWLPPTVPF YSYASSSSSY SPHSPTLAHA HNQLLVHGMP AGAQIPSQNF ALSLSSSSSN  120
PPPQQRRHLA GATGPYGPFT GYAAVLGRSR FLGPAQKLLE EICDVGGRPS QLDRCSDDGL  180
LDLDAMDAAG DVGHEMDSSD RAAAEGVTVS GAEQQWRKTR LISLMEEVCK RYRQYYQQLQ  240
AVISSFETVA GLSNAAPFAS IALRTMSKHF KYLKSTIQSQ LRNTSKVAGG KDSLGKEDMA  300
NFGLMAGGAA LMRGSNANAF SQPHNIWRPQ RGLPERAVSV LRAWLFEHFL HPYPTDSDKQ  360
MLAKQTGLTR NQASNHFMFP VSNWFINARV RLWKPMVEEI HNLEMRQGDK SSAADKNQLG  420
PQQQTQQHSP DSSGRPSDPS NPQQGQSSSM SQGRGAHQHH ASRHIQSELS PMTHDMAGQV  480
SFAYNGGGMA AHHHGSIALS HPQHVEGGAG SSGGVSLTLG LHQNNRAYIA EPLPAALPLN  540
LAHRFGLEDV SDAYAMAASF GGQDRHFTKE MGGHLLHDFV G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-14333399563Homeobox protein Meis2
3k2a_B1e-14333399563Homeobox protein Meis2
4xrs_A1e-14333398158Homeobox protein Meis1
4xrs_B1e-14333398158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB5466460.0AB546646.1 Triticum aestivum WBLH3 mRNA for BEL1-type homeodomain protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165654.10.0BEL1-like homeodomain protein 9
TrEMBLM8CYW30.0M8CYW3_AEGTA; BEL1-like homeodomain protein 9
STRINGEMT329170.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.12e-71TALE family protein