PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32940
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 205aa    MW: 23000.1 Da    PI: 6.9105
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32940genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.51e-1371373128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk...kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
               +G+ F+Pt  el+ +yL +++    + +  +i+e  d++++ P+ L     + +  ++ w +fF+ +    +  + ++   + g W++ g++k+ +    +
  EMT32940   7 AGCVFQPTGCELIGHYLIPRAGLGGVFFPGIIEEGvDVLSLCPRALSFpenHRRDYDEVWgFFFAAKPA-GE--TWTTP-DAGGCWEQYGQEKAYYGGegG 103
               79*******************999987777877655**********63232333355678555555444.33..33444.357************998767 PP

       NAM  97 gelvglkktLvfy.kg.rapkgektdWvmheyrl 128
               +e+v  ++ +++  +  + +  + t+W m+eyrl
  EMT32940 104 REAVAFRRRFAYRyTCrDGEVISLTRWRMKEYRL 137
               77899*****99633314444568********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.2185166IPR003441NAC domain
SuperFamilySSF1019416.02E-166166IPR003441NAC domain
PfamPF023653.8E-117137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MANLAAAGCV FQPTGCELIG HYLIPRAGLG GVFFPGIIEE GVDVLSLCPR ALSFPENHRR  60
DYDEVWGFFF AAKPAGETWT TPDAGGCWEQ YGQEKAYYGG EGGREAVAFR RRFAYRYTCR  120
DGEVISLTRW RMKEYRLNRN AAAFRRAHPG PVPPDVVFVV HKVYKKPLIT PPPPPDSSSS  180
EDEGSESYIV YPQLDEIMRR LTMGN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158493.11e-149uncharacterized protein LOC109743813
TrEMBLM8C6I31e-150M8C6I3_AEGTA; Uncharacterized protein
STRINGEMT329401e-151(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231