PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33310
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 215aa    MW: 23426.6 Da    PI: 9.5302
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33310genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-092877554
              HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
       HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
               +e+Er RR++++   ++L +l+Pk  +  +++  ++    L +Av YIk+L
  EMT33310 28 RKEAERERRQHMKALCAKLASLIPKeHF--SNPDtMTQLGSLDEAVSYIKKL 77
              579**********************876..555569**************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.22E-101789IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.4522377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-132890IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-62977IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-72983IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MEVQAHEATG RKRGRTSGGT TAARVVERKE AERERRQHMK ALCAKLASLI PKEHFSNPDT  60
MTQLGSLDEA VSYIKKLKEK VDELHHRRSS AKAMAAARGA SGASTPTTTP TTSGGAGSPK  120
REKYWEASAP VVEVRQRDDT SLDVVLVCST ERPIILHEVI TILEEEGAEV VNANHSIAGH  180
KIFYTIHSQA FSSRIGIDVS SVSERLRALI LKSGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3538220.0AK353822.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1003A14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190842.11e-152uncharacterized protein LOC109776589
TrEMBLM8C7M51e-155M8C7M5_AEGTA; Uncharacterized protein
STRINGEMT333101e-156(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.15e-15bHLH family protein