PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33311
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 209aa    MW: 22700.1 Da    PI: 9.9042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33311genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-083079554
              HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
              ++  E+ RR+r++   ++L +l+Pk  ++++  ++    L  A  YIk+L
  EMT33311 30 KKDSEKERRQRMKALCDKLASLIPKEHNPHADTMTQLGSLDVAASYIKKL 79
              5678*********************75777777***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.1372579IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.3E-63079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-123095IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.92E-53083No hitNo description
SuperFamilySSF474596.02E-103194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-53185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MAVKAKPARG GERNRASSGT AAAAMILVEK KDSEKERRQR MKALCDKLAS LIPKEHNPHA  60
DTMTQLGSLD VAASYIKKLK ERVDELQHKK AAAQAAATLR GVSGISMAIT TSSGASLDGV  120
KKLEASAPVV EVRQPDDSSM EVRLICNTER PIKLHEVITI LEEEGADIIN ANHSVVGHKI  180
FYTIYSRAFS TRIGIDDSRI SERLGALVR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190835.11e-150uncharacterized protein LOC109776586
TrEMBLM8D9T51e-150M8D9T5_AEGTA; Uncharacterized protein
STRINGEMT333111e-150(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.14e-19bHLH family protein