PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33502
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 256aa    MW: 29363.6 Da    PI: 6.3108
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33502genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.72.1e-2257117359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
               Dg+ WrKYGqK++k+s fpr YYrC+++   +C + k v+++ +edp ++++tY+ eH+++
  EMT33502  57 DGHLWRKYGQKNIKDSAFPRLYYRCSYRedrQCLASKLVQQEnHEDPPLFKVTYTYEHTCN 117
               9**************************99999*******9752689*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182903.01E-2149118IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-2250117IPR003657WRKY domain
SMARTSM007749.1E-3355118IPR003657WRKY domain
PfamPF031061.3E-2357116IPR003657WRKY domain
PROSITE profilePS5081116.19157119IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MDMAWFLLAW RWMLTLYYQI CTGKLEYDIR TFVIIHNYKV WKDRPSWIKH TFTPHFDGHL  60
WRKYGQKNIK DSAFPRLYYR CSYREDRQCL ASKLVQQENH EDPPLFKVTY TYEHTCNTAP  120
VPTPDVVAEL PAPATGDALL LRFDSTGAGH RGAHRMEQER HYQQPAAPGS GWPSMMLSFD  180
SNNRQHEQCT FPSELPPAAS SSSFSTEGLP APSSTTDGGD DGFSTWDSLR YGLNDHVHFG  240
DHSYLPNSGN DGDDNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-14571161068OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186009.11e-161probable WRKY transcription factor 46
TrEMBLN1R5C60.0N1R5C6_AEGTA; Putative WRKY transcription factor 46
STRINGEMT335020.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115292433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-17WRKY DNA-binding protein 46