PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS58266.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 270aa    MW: 30113.2 Da    PI: 9.3322
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS58266.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.41.5e-331270160
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
                ldDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  d+ ++ei+Y+g+Hnh+k
  EPS58266.1 12 LDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSI-DGPITEIVYKGSHNHPK 70
                59****************************************.***************85 PP
2WRKY105.72.5e-33173229359
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 Dgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+vers+ dp++v++tYeg+Hnh+
  EPS58266.1 173 DGYRWRKYGQKVVKGNQNPRSYYKCTTVGCPVRKHVERSSVDPRAVITTYEGKHNHD 229
                 9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081124.398771IPR003657WRKY domain
SuperFamilySSF1182903.92E-261071IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.6E-291071IPR003657WRKY domain
SMARTSM007741.3E-361270IPR003657WRKY domain
PfamPF031064.5E-261369IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.8E-36156231IPR003657WRKY domain
SuperFamilySSF1182902.09E-28163231IPR003657WRKY domain
PROSITE profilePS5081136.552166231IPR003657WRKY domain
SMARTSM007745.6E-38171230IPR003657WRKY domain
PfamPF031061.1E-25173229IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009753Biological Processresponse to jasmonic acid
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010120Biological Processcamalexin biosynthetic process
GO:0010200Biological Processresponse to chitin
GO:0010508Biological Processpositive regulation of autophagy
GO:0042742Biological Processdefense response to bacterium
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0070370Biological Processcellular heat acclimation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
AGDFNPAATR KLDDGYNWRK YGQKQVKGSE NPRSYYKCTY PNCPTKKKVE RSIDGPITEI  60
VYKGSHNHPK PLSGRRSAAQ SYADEHDPTP FLNNAAPVVP SAENNNSSSL TAADEDFEPS  120
RSAGDEVDNG GEPDLKRWKS EAESEGISSL GNRAVREPRV VVQTKSDIDI LIDGYRWRKY  180
GQKVVKGNQN PRSYYKCTTV GCPVRKHVER SSVDPRAVIT TYEGKHNHDV PAARGSSNDH  240
SAVNRPVPYN PNPNHRNDGR TMPYTLQMIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-3512232878Probable WRKY transcription factor 4
2lex_A1e-3512232878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00299DAPTransfer from AT2G38470Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027334209.11e-111WRKY transcription factor WRKY24-like
SwissprotQ6B6R41e-100WRK24_ORYSI; WRKY transcription factor WRKY24
TrEMBLS8C1D90.0S8C1D9_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_008344767.11e-108(Malus domestica)
STRINGXP_007146842.11e-108(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-101WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]