PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS58686.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

WRKY

Protein Properties

Length: 157aa MW: 17475.9 Da PI: 8.8489

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS58686.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	55.1	1.5e-17	2	48	13	59
E--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 13 KevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 K+ k++ + rsYYrCts++C vkk+ver+++dp+vv++tYeg+H h+ EPS58686.1 2 KKKKKTSMRRSYYRCTSTSCGVKKRVERCSDDPSVVVTTYEGTHIHP 48 77899999**************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	2.3E-16	1	50	IPR003657	WRKY domain
PROSITE profile	PS50811	18.464	1	50	IPR003657	WRKY domain
SMART	SM00774	1.9E-11	1	49	IPR003657	WRKY domain
Pfam	PF03106	1.7E-13	2	48	IPR003657	WRKY domain
SuperFamily	SSF118290	4.97E-15	2	50	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence Send to blast
KKKKKKTSMR RSYYRCTSTS CGVKKRVERC SDDPSVVVTT YEGTHIHPCP ITPRGATNFG 60 ILPETALLSG ESCCFPPEFI FPPPLTTTAT SQRAPPPPHR HHHFHSSVSL PPPLSFTSRP 120 FPHPPPSSSS TPQLELRDHG LLQDMLPSEI LHDSKEE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012846599.1	1e-34	PREDICTED: probable WRKY transcription factor 48, partial
TrEMBL	S8C2K8	1e-108	S8C2K8_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.G00080.1.p	2e-34	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1309	24	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	3e-21	WRKY DNA-binding protein 48

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]