PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59668.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 164aa    MW: 18017.8 Da    PI: 6.6813
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59668.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-171263155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  EPS59668.1 12 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 63
                89****99**********99966...3.6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-131263IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-181273IPR016177DNA-binding domain
CDDcd000184.05E-231273No hitNo description
PROSITE profilePS5103218.361371IPR001471AP2/ERF domain
SMARTSM003808.7E-251377IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-181371IPR001471AP2/ERF domain
PRINTSPR003679.7E-51425IPR001471AP2/ERF domain
PRINTSPR003679.7E-55373IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
RRKSSGFARG VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYATQEEA AMAYDMAAIE  60
YRGLNAVTNF DVNHYVAAAA AAKDDSGGSS DSGGIPVNAS KLKEIRTALR RSSPSSSSDP  120
EPEPPRRCFP DDIQTSFDFQ DSSDLADDHE VIFGSYDAFV PSIF
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082628.11e-63AP2-like ethylene-responsive transcription factor At1g16060 isoform X2
SwissprotQ94AN42e-48AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLS8DAE81e-117S8DAE8_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009621695.14e-61(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18152464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.23e-47AP2 family protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  3. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]