PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59788.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family G2-like
Protein Properties Length: 147aa    MW: 16851.3 Da    PI: 9.0215
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59788.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.62.8e-33155155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                k+rlrWt+eLHerFv+ v qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  EPS59788.1  1 KQRLRWTHELHERFVDSVVQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRL 55
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.7E-25156IPR006447Myb domain, plants
PROSITE profilePS5129415.254158IPR017930Myb domain
SuperFamilySSF466898.24E-17156IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-31156IPR009057Homeodomain-like
PfamPF002499.7E-8354IPR001005SANT/Myb domain
PfamPF143792.6E-2487133IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
KQRLRWTHEL HERFVDSVVQ LGGPDRATPK GVLRIMGVQG LTIYHVKSHL QKYRLAKYLP  60
ESSSDGKKAG KNESGDVLSS LDDSSGMQIT EALKLQMEVQ KRLHEQLEVQ RQLQLRIEAQ  120
GKYLKKIIEE QQRLSEVLEA PPCLEDH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A7e-26158158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-26158158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-26158158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-26158158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848512.19e-88PREDICTED: protein PHR1-LIKE 1-like isoform X2
SwissprotQ9SJW05e-86PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLS8DAR31e-102S8DAR3_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.M01479.1.p4e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-63G2-like family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]