PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59984.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 204aa    MW: 22524.2 Da    PI: 5.0287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59984.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.97.9e-161767155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++y+GVr +  +g++v eIr p++   r r++lg+++++e Aa+a +aa  +l+g
  EPS59984.1 17 TRYRGVRKRN-WGKYVTEIRLPNS---RERIWLGTYDSPEVAARAFDAASYCLRG 67
                68*****887.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.2E-91767IPR001471AP2/ERF domain
CDDcd000187.24E-251777No hitNo description
Gene3DG3DSA:3.30.730.101.4E-271876IPR001471AP2/ERF domain
PROSITE profilePS5103221.2591875IPR001471AP2/ERF domain
SMARTSM003802.4E-271881IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-191876IPR016177DNA-binding domain
PRINTSPR003673.0E-91930IPR001471AP2/ERF domain
PRINTSPR003673.0E-94157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MPRSSSDDNS PRNDGATRYR GVRKRNWGKY VTEIRLPNSR ERIWLGTYDS PEVAARAFDA  60
ASYCLRGPNA SFNFPHDPPR FEIPRQLSHE QILTAAQNYA NAFSGGGRTT VHEDMENYWS  120
TLQPLETNNN NYSGGGRTAV QTPQDDTEPI WSELEPLDAN WERSNISSSF GYYNSGFYGG  180
SHDDGYGGGG GGGGGSASSF PWGY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-17877274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855787.14e-35PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLS8C0201e-148S8C020_9LAMI; Uncharacterized protein
STRINGMigut.A00330.1.p1e-34(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-37ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]