PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS60392.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

WRKY

Protein Properties

Length: 139aa MW: 15822.3 Da PI: 4.277

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS60392.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	54.5	2.2e-17	1	39	22	59
EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gCp++k+vers++dp+++++tY+++Hnh+ EPS60392.1 1 RGYYRCSSSkGCPARKQVERSNQDPNMLIVTYTSDHNHP 39 89***998**************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF118290	4.58E-14	1	41	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.9E-17	1	41	IPR003657	WRKY domain
Pfam	PF03106	1.3E-14	1	39	IPR003657	WRKY domain
SMART	SM00774	2.8E-11	1	40	IPR003657	WRKY domain
PROSITE profile	PS50811	20.84	1	41	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence Send to blast
RGYYRCSSSK GCPARKQVER SNQDPNMLIV TYTSDHNHPS PAAARAQKQH EKADSLPENN 60 PDEQQQQQQQ QQLPLSSLGE LPAGDFVWFS DYEPVLEIPI FADEDRESEM RMVFTMGEED 120 ASLFGDLGEL PECSRVFDR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018850734.1	4e-39	PREDICTED: probable WRKY transcription factor 65 isoform X1
Refseq	XP_018850735.1	3e-39	PREDICTED: probable WRKY transcription factor 65 isoform X2
TrEMBL	S8DLK3	2e-99	S8DLK3_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.M01011.1.p	4e-37	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6475	23	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	3e-34	WRKY DNA-binding protein 65

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]