PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61299.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family C2H2
Protein Properties Length: 152aa    MW: 16612.4 Da    PI: 8.1476
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61299.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55e-05103125123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp C+++F++   L  H r+H
  EPS61299.1 103 HVCPFCDRVFKNGQALGGHKRSH 125
                 79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.9335375IPR007087Zinc finger, C2H2
PfamPF139121.5E-75377IPR007087Zinc finger, C2H2
SMARTSM003557.45375IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.46E-853125No hitNo description
PROSITE patternPS0002805575IPR007087Zinc finger, C2H2
PfamPF139128.9E-9103125IPR007087Zinc finger, C2H2
PROSITE profilePS501579.141103125IPR007087Zinc finger, C2H2
SMARTSM003550.015103125IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280105125IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
KEEVAMCLML LSRDTVMENS DSEYFLDESE SMISSINGHP HRSKSSNAGG GKYECFDCSK  60
IFASYQALGG HKPCHKRNLD RYESGENSPE ESSPNNGGGG KSHVCPFCDR VFKNGQALGG  120
HKRSHFIGGN HNNSNGNGSG SSRNNKMKMK MM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855455.12e-27PREDICTED: zinc finger protein ZAT9-like
TrEMBLS8C3Q71e-107S8C3Q7_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.E00055.1.p6e-27(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.15e-21C2H2-like zinc finger protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]