PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS61400.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

Dof

Protein Properties

Length: 149aa MW: 16896 Da PI: 4.3737

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS61400.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	26.7	1.2e-08	2	23	40	61
zf-Dof 40 WtkGGalrnvPvGggrrknkks 61 W GalrnvP+Ggg+rkn+++ EPS61400.1 2 WIICGALRNVPIGGGCRKNRRA 23 8999***************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	0.007	1	22	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence Send to blast
MWIICGALRN VPIGGGCRKN RRAVRRVSPD VLNDDRSKNV TIILPKENVS TTTTTPWGID 60 GDNAIKNVEI EGFRINGCDR SVSTQIAPDL FNGQDFVFVD DWCNNFGLET LWQWDGGDFI 120 EMESMAKIQD RDQMLFNNTW GSFDFSNLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	S8C3M1	1e-104	S8C3M1_9LAMI; Uncharacterized protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]