PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS61509.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 265aa MW: 29544.1 Da PI: 6.8025

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS61509.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.3	7.1e-13	161	217	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +a+lk EPS61509.1 161 KRAKRILANRQSAARSKERKLRYISELEHKVQTLQSEATTLSTQVTILQKDYAELKR 217 9******************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.2E-17	157	221	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.3	159	222	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.7E-12	161	218	No hit	No description
Pfam	PF00170	3.9E-12	161	218	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.15E-12	161	217	No hit	No description
CDD	cd14703	2.64E-23	162	213	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MDAIPFGKSN LGKFGDIKSE GTVADELFNE FINFDHVNAF NSTRTGGVEA DNVLGSFKTK 60 PAEGVKRSAS GDIIAPASRH HRSLSVDSAM LKYDFSDEYL KTPPLSSRSD HLSPSNSAVN 120 DSCCNKVNNL DFGNVGEFND LELKKIMSDE KLAEIAISDP KRAKRILANR QSAARSKERK 180 LRYISELEHK VQTLQSEATT LSTQVTILQK DYAELKRVNN ELKFHIQALE QQAKLKDDLN 240 NALSGEIQRL KLGNMELRDE QQSNI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011083495.1	7e-96	transcription factor VIP1 isoform X2
Refseq	XP_011083496.1	7e-96	transcription factor VIP1 isoform X1
Refseq	XP_020551039.1	7e-96	transcription factor VIP1 isoform X1
TrEMBL	S8C4C5	0.0	S8C4C5_9LAMI; Uncharacterized protein
STRING	Migut.N01296.1.p	5e-82	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1265	24	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-71	bZIP family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]