PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61529.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family C2H2
Protein Properties Length: 99aa    MW: 10843.3 Da    PI: 8.8889
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61529.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.2e-05123123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C +C ksFs++  L  H  +H
  EPS61529.1  1 FTCAICFKSFSSHQALGGHRASH 23
                89**************9999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.51123IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.265123IPR007087Zinc finger, C2H2
PfamPF139125.8E-8124IPR007087Zinc finger, C2H2
PROSITE patternPS000280323IPR007087Zinc finger, C2H2
PfamPF139128.1E-104366IPR007087Zinc finger, C2H2
SMARTSM003550.44466IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804666IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
FTCAICFKSF SSHQALGGHR ASHKIRTAYS KCTAAQNAGD DHHHRCPICF RVFHSGQAMG  60
GHKRSHFVSC SSKAAARLMI PNPVSHILDL NMPAPNDEE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028754144.12e-24zinc finger protein ZAT9-like
RefseqXP_028763341.12e-24zinc finger protein ZAT9-like
RefseqXP_028763346.12e-24zinc finger protein ZAT9-like
TrEMBLS8C4E34e-67S8C4E3_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0002s14460.13e-21(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.13e-24C2H2-like zinc finger protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]