PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61739.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family Nin-like
Protein Properties Length: 90aa    MW: 9917.27 Da    PI: 8.4806
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61739.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK41.23.2e-131557749
      RWP-RK  7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                 e++ + Fslp+ dAA +Lgv++ vLK  C ++G   WP+Rk+
  EPS61739.1 15 YEEVFALFSLPLSDAAESLGVSPAVLKTVCYENGHVVWPFRKL 57
                6788899***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.423180IPR003035RWP-RK domain
PfamPF020425.3E-121457IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
NPNLVPAQGP KAPTYEEVFA LFSLPLSDAA ESLGVSPAVL KTVCYENGHV VWPFRKLVAG  60
KSIEEIKKEA AREKDKQFSE TNVTRKRSDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082903.13e-31uncharacterized protein LOC105165548
TrEMBLS8C4V63e-59S8C4V6_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009766294.12e-25(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107441921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.28e-08Nin-like family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]