PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61807.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family TALE
Protein Properties Length: 424aa    MW: 46643.8 Da    PI: 7.4401
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61807.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.6e-093664031954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  EPS61807.1 366 FEHflHPYPNDSEKLILASQTGLSKNQVSNWFINARVR 403
                 664459******************************88 PP
2BELL902.5e-29234297972
        BELL   9 kakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                   kLlslleeV++rY+ y+ ql+ v+ssFe++aglg+ k+Yt+lAl+a+S+hF +Lk  i+ qi
  EPS61807.1 234 LIKLLSLLEEVERRYEEYHRQLNGVVSSFEMIAGLGAGKSYTALALQAMSKHFSSLKKSIVIQI 297
                 67**********************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.6E-31158295IPR006563POX domain
PfamPF075261.0E-33163293IPR006563POX domain
PROSITE profilePS5007111.855344407IPR001356Homeobox domain
SMARTSM003891.5E-8347411IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-26352413IPR009057Homeodomain-like
CDDcd000861.46E-11353408No hitNo description
SuperFamilySSF466892.57E-17353415IPR009057Homeodomain-like
PfamPF059201.4E-16364403IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MVSEQSARDS DSNILHHFII SNSMANNQAA PQFGDNHFDP YGGGAPAAVT NNGNPFPHSL  60
PSTIIAPPRL PEESGNIVQG TRLMDLLGTS RESSGPARML SLSLGSVSGR QRSLNPVLIN  120
HQQITRGSGD DNNHGGFDSF TGGGGFSNQC CSTSYGAESF SAVIGNSKYL KPAQALLEEM  180
VSVGGREMDE SNKKLVERLF SPAGKGLHGI STELKAELSN GEMINEQGTM YLNLIKLLSL  240
LEEVERRYEE YHRQLNGVVS SFEMIAGLGA GKSYTALALQ AMSKHFSSLK KSIVIQIRAA  300
KHKIEKDMPK IGARLSQLSL FVVEQEPPRN RVSLQQLGLL QNPRQAFRPI RGLPENSVAI  360
LRAWLFEHFL HPYPNDSEKL ILASQTGLSK NQVSNWFINA RVRLWKPMIE EMYKDEFGEF  420
STES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5bng_A6e-16353411159Homeobox protein Meis2
5bng_B6e-16353411159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083617.11e-171BEL1-like homeodomain protein 11
SwissprotQ1PFD12e-91BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLS8DPT00.0S8DPT0_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_18s0001g13130.t011e-139(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA86022228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.19e-82BEL1-like homeodomain 11
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]