PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS63193.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 109aa MW: 12687.6 Da PI: 10.8373

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS63193.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35	3.1e-11	10	51	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L EPS63193.1 10 KRIKRILANRQSAQRSRVRKLKYISELERSVSSLQAEVSVLS 51 999*********************************987665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-13	6	70	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.289	8	60	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.0E-10	10	51	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.63E-12	10	64	No hit	No description
Gene3D	G3DSA:1.20.5.170	8.0E-13	10	61	No hit	No description
CDD	cd14703	8.97E-17	11	61	No hit	No description
PROSITE pattern	PS00036	0	13	28	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence Send to blast
SSSERVVDPK RIKRILANRQ SAQRSRVRKL KYISELERSV SSLQAEVSVL SPRVAFMDHQ 60 RLLLTADNSV LKQRIAALAH DKIFKDAHQE ALKNEIDELR KKMYYQQNV

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009777081.1	8e-57	PREDICTED: basic leucine zipper 61-like
Refseq	XP_016468123.1	8e-57	PREDICTED: basic leucine zipper 61-like
Refseq	XP_019254416.1	9e-57	PREDICTED: basic leucine zipper 61-like
Swissprot	Q9M2K4	4e-53	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	S8DJY1	6e-71	S8DJY1_9LAMI; Uncharacterized protein (Fragment)
STRING	XP_009777081.1	3e-56	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1775	24	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-55	bZIP family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]