PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS64185.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

Nin-like

Protein Properties

Length: 133aa MW: 15374.8 Da PI: 10.3349

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS64185.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	86.4	2.5e-27	7	57	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k++s e +s+yF+lpi++AA+eL+v+lT+LK++CR++GIkRWPhRk+ sl EPS64185.1 7 SKKLSREAISEYFYLPITQAARELNVGLTLLKKRCRELGIKRWPHRKLMSL 57 689*********************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.905	1	79	IPR003035	RWP-RK domain
Pfam	PF02042	5.5E-22	10	57	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence Send to blast
DCKNGSSKKL SREAISEYFY LPITQAAREL NVGLTLLKKR CRELGIKRWP HRKLMSLQTL 60 IKNVQELGRD EDREGVRESV QVLEQEKKLM EVIPDLQLED KTKRLRQACF KANYKKRKLM 120 IESSSSSSSS SSS

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011071711.1	9e-64	uncharacterized protein LOC105157108
Swissprot	Q9M9U9	6e-51	RKD1_ARATH; Protein RKD1
TrEMBL	S8CBE8	1e-90	S8CBE8_9LAMI; Uncharacterized protein (Fragment)
STRING	VIT_17s0000g06250.t01	3e-62	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4274	21	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	2e-52	RWP-RK domain-containing protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]