PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS64516.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 135aa    MW: 14978.3 Da    PI: 10.9872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS64516.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-14348454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 h + ErrRR+++N++f+ Lr+llP++     +K +Ka++L  ++eYI  L
  EPS64516.1  3 HHIISERRRREKLNESFHLLRSLLPSC-----PKKDKASVLSYTTEYIAAL 48
                58999*********************9.....79**************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.783148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.70E-11153No hitNo description
SuperFamilySSF474595.76E-18272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-12448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-13554IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
QLHHIISERR RREKLNESFH LLRSLLPSCP KKDKASVLSY TTEYIAALKI QVEEVRRRNQ  60
ALLLESRNPN VQIERAPPPA GTGGGSSRLV VLRIGLTRSV VAAAESSGGN KALNLTIGIL  120
DFLKQFKNVN LVSLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1712ERRRRE
2813RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094007.13e-28putative transcription factor bHLH041
TrEMBLS8CIL52e-91S8CIL5_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_11s0016g02070.t013e-25(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-18bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]